The detailed information of tRNA gene sequence


Sequence ID>WENV180098391
Genome IDMTBK01242864
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 846
End posion on genome 921
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
attttaattg
tRNA gene sequence 
GGTCACGTCGCCAAGAGGCTAAGGCAACAGTTTGCAAAACTGTTATGCGTGGGTTCGACT
CCCACCGTGACCTCCA
Downstream region at tRNA end position 
aaaattattt
Secondary structure (Cloverleaf model)
>WENV180098391	Cys	GCA
                   g      TCCA aaaattattt
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     C - G
                     G - C          T C
                    T     C A C C C     A
      A G A        C      | | | | |     G
    G       A C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T A          A     TATGC
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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