The detailed information of tRNA gene sequence


Sequence ID>WENV180098393
Genome IDMTBK01242964
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 24877
End posion on genome 24953
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aaacaaataa
tRNA gene sequence 
GGTCCGGTAGTTCAGTTTGGTTAGAATACGTGCCTGTCACGCACGGGGTCGCGGGTTCGA
GTCCCGTCCGGACCGCCc
Downstream region at tRNA end position 
agaaaagagc
Secondary structure (Cloverleaf model)
>WENV180098393	Asp	GTC
                   a      GCCc agaaaagagc
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
    T T G A        A      + | | | |     G
  T         C T T G       G C G G G     C
  G         | | | +                 T T
  G         G A A T
    T T A          A     GGGTC
                    C - G
                    G - C
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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