The detailed information of tRNA gene sequence


Sequence ID>WENV180098398
Genome IDMTBK01243317
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 13400
End posion on genome 13328
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ggtaattcgg
tRNA gene sequence 
CGCAGGGTGGAGCAGTTGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTCGAGT
CCTTCCCCTGCTAaat
Downstream region at tRNA end position 
agttggtttg
Secondary structure (Cloverleaf model)
>WENV180098398	fMet	CAT
                   g      Aaat agttggtttg
                     C   T
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T G
                    T     C T T C C     A
      T G A        G      |   | | |     G
    T       C G A G       G T A G G     C
    G       | | | |                 T T
    G       G C T C
      C A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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