The detailed information of tRNA gene sequence


Sequence ID>WENV180098403
Genome IDMTBK01243384
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1559
End posion on genome 1634
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
cgctccattt
tRNA gene sequence 
GCGCCTGTAGCTCAGGGGACAGAGCAATGGACTTCTAATCCATGGGCCGGAGGTTCGAAT
CCTCCCAGGCGTGCCA
Downstream region at tRNA end position 
tgattattaa
Secondary structure (Cloverleaf model)
>WENV180098403	Arg	TCT
                   t      GCCA tgattattaa
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C C T C C     A
      G G A        A      | | | | |     G
    G       C T C G       G G A G G     C
    G       | | | |                 T T
    A       G A G C
      C A          A     GGGCC
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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