The detailed information of tRNA gene sequence


Sequence ID>WENV180098405
Genome IDMTBK01243486
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 609
End posion on genome 534
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tacataatat
tRNA gene sequence 
AGGAGTGTAGTTCAGTTGGTAGAACGTCGGTCTCCAAAACCGAATGTCGTGGGTTCGAGT
CCTGCCACTCCTGCCA
Downstream region at tRNA end position 
atcatcacaa
Secondary structure (Cloverleaf model)
>WENV180098405	Trp	CCA
                   t      GCCA atcatcacaa
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | + + | |     G
    T       C T T G       G T G G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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