The detailed information of tRNA gene sequence


Sequence ID>WENV180098406
Genome IDMTBK01243486
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 502
End posion on genome 426
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gttatgatat
tRNA gene sequence 
GGGCTTGTAGCTCAGGTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCGAG
TCCATCCAAGCCCACCA
Downstream region at tRNA end position 
ttaaaaattt
Secondary structure (Cloverleaf model)
>WENV180098406	Ile	GAT
                   t      ACCA ttaaaaattt
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     T - A
                     G - C          T G
                    T     C T A C C     A
      G G A        A      | | | | |     G
    T       C T C G       G A T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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