The detailed information of tRNA gene sequence


Sequence ID>WENV180098407
Genome IDMTBK01243486
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 413
End posion on genome 339
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
aaaaattttt
tRNA gene sequence 
GGGCCTTTAGCTCAGTTGGTTAGAGCGCCCGGCTCATAACCGGTAGGTCCAAGGTTCGAG
TCCTTGAAGGCCCACta
Downstream region at tRNA end position 
tgacctaacc
Secondary structure (Cloverleaf model)
>WENV180098407	Ile2	CAT
                   t      ACta tgacctaacc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     G T T C C     A
      T G A        A      | | | | |     G
    T       C T C G       C A A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C   T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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