The detailed information of tRNA gene sequence


Sequence ID>WENV180098408
Genome IDMTBK01243486
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 217
End posion on genome 142
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
ctgcgatagt
tRNA gene sequence 
GCCCAGATAGCTCAGTCGGTAGAGCAGGAGACTGAAAATCTCCGTGTCCGTGGTTCGATT
CCGCGTTTGGGCACCA
Downstream region at tRNA end position 
tttttttccg
Secondary structure (Cloverleaf model)
>WENV180098408	Phe	GAA
                   t      ACCA tttttttccg
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G + T
                     A - T          T T
                    T     G C G C C     A
      T G A        A      | | + | |     G
    C       C T C G       C G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    G - C
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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