The detailed information of tRNA gene sequence


Sequence ID>WENV180098412
Genome IDMTBK01243826
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 908
End posion on genome 833
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gaactcaacc
tRNA gene sequence 
GGGGATATAGCTCAGTTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCACGAGTTCGAAC
CTCGTTATCTCCACCA
Downstream region at tRNA end position 
gcgcaagagg
Secondary structure (Cloverleaf model)
>WENV180098412	Ala	TGC
                   c      ACCA gcgcaagagg
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     A - T          C A
                    T     T G C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A C G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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