The detailed information of tRNA gene sequence


Sequence ID>WENV180098426
Genome IDMTBK01244610
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 5889
End posion on genome 5963
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
gtgatcgagc
tRNA gene sequence 
GCCCCTGTAGCTCAGACTGGGAGAGCGCCAGACTGAAGATCTGGTTGTCCCCGGTTCAAA
TCCGGGCGGGGGCACtc
Downstream region at tRNA end position 
caacagttgg
Secondary structure (Cloverleaf model)
>WENV180098426	Phe	GAA
                   c      ACtc caacagttgg
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     G G G C C     A
      A G A        A      | | | | |     A
    C       C T C G       C C C G G     C
    T       | | | |                 T T
    G       G A G C
      G G A        G     TTGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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