The detailed information of tRNA gene sequence


Sequence ID>WENV180098458
Genome IDMTBK01246363
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 270
End posion on genome 196
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
gatgctatga
tRNA gene sequence 
GGGCCCTTAGCTCAGTTGGTCAGAGCGGCGGACTCATAATCCGTTGGTCGCAGGTTCAAG
TCCTGCAGGGCCCACaa
Downstream region at tRNA end position 
cttctggata
Secondary structure (Cloverleaf model)
>WENV180098458	Ile2	CAT
                   a      ACaa cttctggata
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     C G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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