The detailed information of tRNA gene sequence


Sequence ID>WENV180098463
Genome IDMTBK01246695
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 165
End posion on genome 238
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
aaagatatgc
tRNA gene sequence 
GGGCAATTAGCTCAGTTGGTTAGAGTACAAGCATGACACGCTTGGGGTCACTGGTTCGAT
TCCAGTATTGCCCAatg
Downstream region at tRNA end position 
ctcccctttt
Secondary structure (Cloverleaf model)
>WENV180098463	Val	GAC
                   c      Aatg ctcccctttt
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T
                     T - A          T T
                    T     T G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     GGGTC
                    C - G
                    A - T
                    A - T
                    G - C
                    C - G
                  A       C
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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