The detailed information of tRNA gene sequence


Sequence ID>WENV180098465
Genome IDMTBK01246713
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 281
End posion on genome 357
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aacgaaatac
tRNA gene sequence 
GGCGCAGTAGTTCAGTTGGTTAGAATGCCAGCCTGTCACGCTGGAGGTCGAGGGTTCGAG
CCCCTTCTGCGTCGCCA
Downstream region at tRNA end position 
aatgcccaga
Secondary structure (Cloverleaf model)
>WENV180098465	Asp	GTC
                   c      GCCA aatgcccaga
                     G - C
                     G + T
                     C - G
                     G - C
                     C - G
                     A - T
                     G - C          C G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G A G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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