The detailed information of tRNA gene sequence


Sequence ID>WENV180098481
Genome IDMTBK01248427
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 187
End posion on genome 98
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gatgatcgac
tRNA gene sequence 
GGAAGGATGGCAGAGCGGACGAATGCACCGGTCTTGAAAACCGACGGGCCTTCACGGGTC
CCGGGGGTTCGAATCCCCCTCCTTCCGCCA
Downstream region at tRNA end position 
ccgtcgatga
Secondary structure (Cloverleaf model)
>WENV180098481	Ser	TGA
                   c      GCCA ccgtcgatga
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    A       A T G C
      C G A        A     CGGGCCTTCACGGGTCCC
                    C   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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