The detailed information of tRNA gene sequence


Sequence ID>WENV180098484
Genome IDMTBK01249111
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 566
End posion on genome 490
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aaattatgat
tRNA gene sequence 
GGTCGCTTAGCTCAGCCGGTTAGAGCGCTACGCTCACATCGTAGAGGTCGCTGGTTCGAG
TCCAGCAGCGACCACCA
Downstream region at tRNA end position 
ttccaataca
Secondary structure (Cloverleaf model)
>WENV180098484	Val	CAC
                   t      ACCA ttccaataca
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     C - G
                     T - A          T G
                    T     C G A C C     A
      C G A        A      | | | | |     G
    C       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  C       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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