The detailed information of tRNA gene sequence


Sequence ID>WENV180098486
Genome IDMTBK01249217
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2149
End posion on genome 2225
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
catctagtgg
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTTGTCGGTTCAAA
TCCGGCCCCCGCAACCA
Downstream region at tRNA end position 
atttagaatt
Secondary structure (Cloverleaf model)
>WENV180098486	fMet	CAT
                   g      ACCA atttagaatt
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G G C C     A
      T G A        G      | + | | |     A
    C       C G A G       G T C G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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