The detailed information of tRNA gene sequence


Sequence ID>WENV180098499
Genome IDMTBK01250028
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1113
End posion on genome 1187
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cggttatttg
tRNA gene sequence 
GGCCTAGTCGCCAAGTGGTAAGGCAAGAGTCTGCAAAACTCTTATACGGCGGTTCGATTC
CGCCCTAGGCCTCCA
Downstream region at tRNA end position 
aaattgaata
Secondary structure (Cloverleaf model)
>WENV180098499	Cys	GCA
                   g      TCCA aaattgaata
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T
                     G - C          T T
                    T     C C G C C     A
        G A        C      | | | | |     G
      T     A C C G       G G C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATAC
                    A - T
                    G - C
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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