The detailed information of tRNA gene sequence


Sequence ID>WENV180098509
Genome IDMTBK01250466
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 335
End posion on genome 409
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
gtgctccaat
tRNA gene sequence 
GCTTTTGTAGCTCAATGGTAGAGCAAACCTTTCGTAAGGGTAAGGTTATGGGTTCAAGTC
CCCTCAAAAGCTCCA
Downstream region at tRNA end position 
caatataaat
Secondary structure (Cloverleaf model)
>WENV180098509	Thr	CGT
                   t      TCCA caatataaat
                     G - C
                     C - G
                     T - A
                     T - A
                     T - A
                     T - A
                     G - C          T G
                    T     T C C C C     A
        A A        A      |   | | |     A
      T     C T C G       A T G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTT
                    A   A
                    A - T
                    C - G
                    C - G
                    T + G
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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