The detailed information of tRNA gene sequence


Sequence ID>WENV180098510
Genome IDMTBK01250466
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 555
End posion on genome 630
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
atttatatat
tRNA gene sequence 
GCACCTGTAGTTCAGTTGGTAGAATAGTTCCGTGGTAAGGAACAGGTCATGGGTTCGATC
CCCATCGGGTGCTCCA
Downstream region at tRNA end position 
aaaaattgtt
Secondary structure (Cloverleaf model)
>WENV180098510	Thr	GGT
                   t      TCCA aaaaattgtt
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     T + G
                     G - C          C T
                    T     T A C C C     A
      T G A        A      | | | | |     G
    T       C T T G       A T G G G     C
    G       | | | +                 T T
    G       G A A T
      T A          A     AGGTC
                    G - C
                    T - A
                    T - A
                    C - G
                    C - G
                  G       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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