The detailed information of tRNA gene sequence


Sequence ID>WENV180098516
Genome IDMTBK01250669
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2651
End posion on genome 2746
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ccttatagat
tRNA gene sequence 
GGGAGTGGTTAGGTCCCGGTGGGCCTCCCGGTCTTCAAAATCGGTGTCGGGTCGCGTTGC
GAGCCGTGGTGGGTTCGACTCCCATCCATTCCCGCCt
Downstream region at tRNA end position 
tccttttaaa
Secondary structure (Cloverleaf model)
>WENV180098516	SeC	TCA
                   t      GCCt tccttttaaa
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     T - A
                     G - C
                     G - C          T C
                    T     T A C C C     A
      C C C        T      + | | | |     G
    G       T G G A       G T G G G     C
    G       + | | |                 T T
    T       G C C T
      G G          C     TGTCGGGTCGCGTTGCGAGCCGTG
                    C - G
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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