The detailed information of tRNA gene sequence


Sequence ID>WENV180098518
Genome IDMTBK01251027
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 270
End posion on genome 196
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gctccactat
tRNA gene sequence 
GGGAGTGTAGTTTAATTGGTAAAGTAGTGGTCTCCAAAATCACCGATCAGAGTTCGAGTC
TCTGCGCTCCTGCCA
Downstream region at tRNA end position 
acgccttctt
Secondary structure (Cloverleaf model)
>WENV180098518	Trp	CCA
                   t      GCCA acgccttctt
                     G + T
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C          T G
                    T     G T C T C     A
      T A A        A      | | | | |     G
    T       T T T G       C A G A G     C
    G       | | + +                 T T
    G       A A G T
      T A          A     CGAT
                    G - C
                    T - A
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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