The detailed information of tRNA gene sequence


Sequence ID>WENV180098521
Genome IDMTBK01251044
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 469
End posion on genome 393
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccaggatcgt
tRNA gene sequence 
GGAACTGTGGTGTAGATGGTTAACACGCCGGCCTGTCACGCCGGAGATCGCGGGTTCGAG
TCCCGTCGGTTCCGCCA
Downstream region at tRNA end position 
ttattttagc
Secondary structure (Cloverleaf model)
>WENV180098521	Asp	GTC
                   t      GCCA ttattttagc
                     G - C
                     G - C
                     A - T
                     A - T
                     C - G
                     T + G
                     G - C          T G
                    T     T G C C C     A
      A G A        G      + | | | |     G
    T       T G T G       G C G G G     C
    G       | | | |                 T T
    G       A C A C
      T T A        G     AGATC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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