The detailed information of tRNA gene sequence


Sequence ID>WENV180098525
Genome IDMTBK01251044
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 108
End posion on genome 33
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ttgcataggg
tRNA gene sequence 
GCCCCCATCGTCTAGCGGCCTAGGACACCGCCCTTTCACGGCGAAGGCACCGGTTCAAAT
CCGGTTGGGGGTACCA
Downstream region at tRNA end position 
cttacattaa
Secondary structure (Cloverleaf model)
>WENV180098525	Glu	TTC
                   g      ACCA cttacattaa
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G G C C     A
      C G A        C      | | | | |     A
    G       T C T G       A C C G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     AGGC
                    C   A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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