The detailed information of tRNA gene sequence


Sequence ID>WENV180098527
Genome IDMTBK01251114
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 676
End posion on genome 601
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ctttcttttt
tRNA gene sequence 
GGCCCCATCGTCTAGTGGCCTAGGACGCCGGGTTCTCAGCCCGGTAACAGGGGTTCGACT
CCCCTTGGGGCCGCCA
Downstream region at tRNA end position 
aaatatgata
Secondary structure (Cloverleaf model)
>WENV180098527	Glu	CTC
                   t      GCCA aaatatgata
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T C
                    T     T C C C C     A
      T G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        G     TAAC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  T       G
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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