The detailed information of tRNA gene sequence


Sequence ID>WENV180098530
Genome IDMTBK01251655
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 88
End posion on genome 171
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
accaactgta
tRNA gene sequence 
GGAAGCGTCGCATAGTGGTTAATTGCACTGGTTTCGAAAACCAGAGCCTCACGGCTTCGT
GGGTTCGAATCCCACCGCTTCCGCat
Downstream region at tRNA end position 
cctaggattc
Secondary structure (Cloverleaf model)
>WENV180098530	Ser	CGA
                   a      GCat cctaggattc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G T G G G     C
    G         | | |                 T T
    T       T T G C
      T A A        A     AGCCTCACGGCTTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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