The detailed information of tRNA gene sequence


Sequence ID>WENV180098534
Genome IDMTBK01251944
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 690
End posion on genome 766
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
cggccgtttt
tRNA gene sequence 
CGGGGTGTAGCTCAGTCCGGTTTAGAGTACTCGTCTGGGGGGCGAGTGGTCGCTAGTTCG
AATCTAGTCACCCCGACtt
Downstream region at tRNA end position 
caacaagcgt
Secondary structure (Cloverleaf model)
>WENV180098534	Pro	GGG
                   t      ACtt caacaagcgt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G A T C     A
    C T G A        A      + | | | |     G
  C         C T C G       G C T A G     C
  G         | | | +                 T T
  G         G A G T
    T T T A        A     TGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    T + G
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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