The detailed information of tRNA gene sequence


Sequence ID>WENV180098535
Genome IDMTBK01251987
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2037
End posion on genome 1961
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tattcattat
tRNA gene sequence 
GGTGCGGTAGTTCAGTTGGTTAGAATATCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
TCCCGTCCGCACCGCCA
Downstream region at tRNA end position 
ccatgtcctt
Secondary structure (Cloverleaf model)
>WENV180098535	Asp	GTC
                   t      GCCA ccatgtcctt
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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