The detailed information of tRNA gene sequence


Sequence ID>WENV180098552
Genome IDMTBK01252732
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 3166
End posion on genome 3091
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
ataataatat
tRNA gene sequence 
GCCCAGATAGCTCAGTCGGTAGAGCAGGAGACTGAAAATCTCCGTGTCCGTGGTTCGATT
CCGCGTTTGGGCACCA
Downstream region at tRNA end position 
aaaaagattt
Secondary structure (Cloverleaf model)
>WENV180098552	Phe	GAA
                   t      ACCA aaaaagattt
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G + T
                     A - T          T T
                    T     G C G C C     A
      T G A        A      | | + | |     G
    C       C T C G       C G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    G - C
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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