The detailed information of tRNA gene sequence


Sequence ID>WENV180098554
Genome IDMTBK01252933
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 473
End posion on genome 402
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aaataaatat
tRNA gene sequence 
GGTCGGTTTACCGAGTGGCTAGGTGGTGGTCTGCAAAACCATTTACGGCGGTTCGAATCC
GCCACCGACCTCaa
Downstream region at tRNA end position 
ccccgttaaa
Secondary structure (Cloverleaf model)
>WENV180098554	Cys	GCA
                   t      TCaa ccccgttaaa
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     C C G C C     A
        G A        T      | | | | |     G
      T     G C C A       G G C G G     C
      G       | | |                 T T
      G     A G G T
        C T        G     TTAC
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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