The detailed information of tRNA gene sequence


Sequence ID>WENV180098563
Genome IDMTBK01254237
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1904
End posion on genome 1830
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ttccagatat
tRNA gene sequence 
CGCGGGGTAGAGCAGTGGCAGCTCGTCAGGCTCATAACCTGAAGGTCGTTGGTTCGAATC
CAACCCCCGCAACCA
Downstream region at tRNA end position 
ctatttctgt
Secondary structure (Cloverleaf model)
>WENV180098563	fMet	CAT
                   t      ACCA ctatttctgt
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A A C C     A
        G A        A      | | | | |     G
      T     C G A G       G T T G G     C
      G     | | | |                 T T
      G     G C T C
        C A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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