The detailed information of tRNA gene sequence


Sequence ID>WENV180098567
Genome IDMTBK01254735
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1534
End posion on genome 1461
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
accacgtccc
tRNA gene sequence 
GCCTCCTTAGCTCAGTCGGCAGAGCATTTCCATGGTAAGGAAAAGGTCGTCAGTTCGATT
CTGACAGGGGGCTCga
Downstream region at tRNA end position 
tcctgaggtt
Secondary structure (Cloverleaf model)
>WENV180098567	Thr	GGT
                   c      TCga tcctgaggtt
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     C - G
                     T - A          T T
                    T     C A G T C     A
      T G A        A      | | | | |     G
    C       C T C G       G T C A G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTC
                    T - A
                    T - A
                    T - A
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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