The detailed information of tRNA gene sequence


Sequence ID>WENV180098570
Genome IDMTBK01254820
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1527
End posion on genome 1439
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
taatgaactt
tRNA gene sequence 
GGAAGTGTATCGAAGAGGTCATAACGAGCCGCACTCGAAATGCGGTTGCCTTTCGGGGCA
CGTGGGTTCGAATCCCACCGCTTCCGCCA
Downstream region at tRNA end position 
taaaacttta
Secondary structure (Cloverleaf model)
>WENV180098570	Ser	CGA
                   t      GCCA taaaacttta
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     G - C          T A
                    T     C A C C C     A
    G A G A        A      | | | | |     G
  G         A G C T       G T G G G     C
  T           | | |                 T T
  C         A C G A
    A T A          G     TTGCCTTTCGGGGCAC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK