The detailed information of tRNA gene sequence


Sequence ID>WENV180098582
Genome IDMTBK01255636
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 111315
End posion on genome 111241
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cattatactc
tRNA gene sequence 
GCCGTCTTAGCTCAGTGGTAGAGCACACGCTTCACACGCGTGGGGCCACAAGTTCAAATC
TTGTAGACGGCACCA
Downstream region at tRNA end position 
tttcctgata
Secondary structure (Cloverleaf model)
>WENV180098582	Val	CAC
                   c      ACCA tttcctgata
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A
                     C - G
                     T - A          T A
                    T     T G T T C     A
        G A        A      | | | | |     A
      T     C T C G       A C A A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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