The detailed information of tRNA gene sequence


Sequence ID>WENV180098587
Genome IDMTBK01255982
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 118
End posion on genome 193
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
ttaggcgaag
tRNA gene sequence 
GGACCCCTAGCTCAGTGGTTAGAGCAGCAGACTCATAATCTGTTGGTCCTGGGTTCAAAT
CCCAGGGGGTCCACCA
Downstream region at tRNA end position 
tctctatcat
Secondary structure (Cloverleaf model)
>WENV180098587	Ile2	CAT
                   g      ACCA tctctatcat
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     C - G          T A
                    T     G A C C C     A
      T G A        A      | | | | |     A
    G       C T C G       C T G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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