The detailed information of tRNA gene sequence


Sequence ID>WENV180098590
Genome IDMTBK01256343
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 585
End posion on genome 660
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
tcaattttat
tRNA gene sequence 
GGGTTGTTAGCTCAGTTGGTTTAGAGCATTACCTTGACAGGGTAGGGGTCACTGGTTCGA
ATCCAGTACAACCCACtg
Downstream region at tRNA end position 
attattcttt
Secondary structure (Cloverleaf model)
>WENV180098590	Val	GAC
                   t      ACtg attattcttt
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C
                     T - A          T A
                    T     T G A C C     A
    T T G A        A      | | | | |     G
  G         C T C G       A C T G G     C
  G         | | | |                 T T
  T         G A G C
    T T A          A     GGGTC
                    T + G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       G
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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