The detailed information of tRNA gene sequence


Sequence ID>WENV180098605
Genome IDMTBK01257183
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 748
End posion on genome 824
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
cacatcatgt
tRNA gene sequence 
CGGGGCGTGGCGCAGTCTGGTAGCGTATCTGAATGGGGTTCAGAGGGCCGGTGGTTCAAA
TCCACTCGCCCCGACCA
Downstream region at tRNA end position 
ttttcccagc
Secondary structure (Cloverleaf model)
>WENV180098605	Pro	GGG
                   t      ACCA ttttcccagc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C A C C     A
      T G A        G      + | | | |     A
    C       C G C G       G G T G G     C
    T       | | | +                 T T
    G       G C G T
      G T A        A     GGGCC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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