The detailed information of tRNA gene sequence


Sequence ID>WENV180098610
Genome IDMTBK01257280
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1533
End posion on genome 1606
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ccggaagatc
tRNA gene sequence 
GGGCTTATAGCTCAGCTGGAAGAGCGCCGCCTTTGCGAGGCGGAGGCCGGGGGTTCAAAT
CCCCCTGAGTCCACtt
Downstream region at tRNA end position 
cgatgcaccc
Secondary structure (Cloverleaf model)
>WENV180098610	Ala	TGC
                   c      ACtt cgatgcaccc
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     T + G
                     A - T          T A
                    T     C C C C C     A
      C G A        A      | | | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       G
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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