The detailed information of tRNA gene sequence


Sequence ID>WENV180098614
Genome IDMTBK01257666
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1248
End posion on genome 1173
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
tggaaagtgg
tRNA gene sequence 
GGTCCCGTAGCTCAAATGGATAGAGCAGCGGTTTCCTAAACCGTAGATCGGGGTTCAATT
CCCTGCGGGGCTGCCA
Downstream region at tRNA end position 
cttaccactt
Secondary structure (Cloverleaf model)
>WENV180098614	Arg	CCT
                   g      GCCA cttaccactt
                     G + T
                     G - C
                     T + G
                     C - G
                     C - G
                     C - G
                     G - C          T T
                    T     G T C C C     A
      A A A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGAT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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