The detailed information of tRNA gene sequence


Sequence ID>WENV180098618
Genome IDMTBK01257912
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 16727
End posion on genome 16652
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
atgtagagtT
tRNA gene sequence 
CGGGGTGTAGCTCAGGTGGCTAGAGCGCTACGTTCGGGACGTAGAGGTCGTCTGTTCAAG
TCAGATCACCCCGATtt
Downstream region at tRNA end position 
gtagttttat
Secondary structure (Cloverleaf model)
>WENV180098618	Pro	CGG
                   T      ATtt gtagttttat
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T A G A C     A
      G G A        A      + | | | |     A
    T       C T C G       G T C T G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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