The detailed information of tRNA gene sequence


Sequence ID>WENV180098622
Genome IDMTBK01258096
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 240
End posion on genome 166
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttgttcccgg
tRNA gene sequence 
GGCGGCATAGCCAAGTGGTAAGGCGGCGGTCTGCAAAACCGCTACTCACGGGTTCGACTC
CCGTTGCCGCCTCCA
Downstream region at tRNA end position 
ttttcttttg
Secondary structure (Cloverleaf model)
>WENV180098622	Cys	GCA
                   g      TCCA ttttcttttg
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T C
                    T     T G C C C     A
        G A        A      | | | | |     G
      T     A C C G       A C G G G     C
      G       | | |                 T T
      G     A G G C
        T A        G     TACTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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