The detailed information of tRNA gene sequence


Sequence ID>WENV180098632
Genome IDMTBK01258644
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 9791
End posion on genome 9866
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ttgccaggcc
tRNA gene sequence 
GGGGATGTAGCTCAGCTGGGAGAGCGCGGCGTTCGCAACGCCGAGGCCAGGAGTTCGATC
CTCCTCATCTCCACCA
Downstream region at tRNA end position 
ggtcatcatc
Secondary structure (Cloverleaf model)
>WENV180098632	Ala	CGC
                   c      ACCA ggtcatcatc
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          C T
                    T     T C C T C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    C - G
                    G - C
                    G - C
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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