The detailed information of tRNA gene sequence


Sequence ID>WENV180098640
Genome IDMTBK01258991
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 113
End posion on genome 37
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gggtatcaaT
tRNA gene sequence 
GGGCGCGTAGCTCAGCTGGTTAGAGCGCACGGTTCACATCCGTGAGGTTCGGAGGTTCGA
GCCCTCTCGCGCCCATtt
Downstream region at tRNA end position 
tttgattttc
Secondary structure (Cloverleaf model)
>WENV180098640	Val	CAC
                   T      ATtt tttgattttc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          C G
                    T     T C T C C     A
      C G A        A      + | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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