The detailed information of tRNA gene sequence


Sequence ID>WENV180098644
Genome IDMTBK01259177
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 18101
End posion on genome 18175
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position
attttgcagt
tRNA gene sequence
GGGGACTTAGCTCAGCGGCAGAGCGTTCGGTTCACATCCGAAAGGCCACAGGTTCAAGCC
CTGTAGTCCCCACCA
Downstream region at tRNA end position
tttatttgca
Secondary structure (Cloverleaf model)
>WENV180098644	Val	CAC
                   t      ACCA tttatttgca
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     T - A          C G
                    T     T G T C C     A
        G A        A      | | | | |     A
      C     C T C G       A C A G G     C
      G     | | | |                 T T
      G     G A G C
        C A        G     AGGCC
                    T - A
                    T - A
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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