The detailed information of tRNA gene sequence


Sequence ID>WENV180098646
Genome IDMTBK01259199
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 139
End posion on genome 232
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttaatatcat
tRNA gene sequence 
GGAGAGATGGCCGAGTAGGCTGAAGGCGCTCGCCTGCTAAGCGAGTATACGGCTAGTAAC
TGTATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tttacaaagt
Secondary structure (Cloverleaf model)
>WENV180098646	Ser	GCT
                   t      GCCA tttacaaagt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    A T G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TATACGGCTAGTAACTGTATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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