The detailed information of tRNA gene sequence


Sequence ID>WENV180098661
Genome IDMTBK01259948
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 442
End posion on genome 517
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cttcttgaat
tRNA gene sequence 
GGGGATGTAGCTCAGTTGGGAGAGCGCCTGCTTTGCAAGCAGGAGGTCAGCGGTTCGAGA
CCGCTCATCTCCACCA
Downstream region at tRNA end position 
tacaagaagc
Secondary structure (Cloverleaf model)
>WENV180098661	Ala	TGC
                   t      ACCA tacaagaagc
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          A G
                    T     T C G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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