The detailed information of tRNA gene sequence


Sequence ID>WENV180098668
Genome IDMTBK01260675
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 327
End posion on genome 238
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgcgacgctc
tRNA gene sequence 
GGAGAGGTCGCATAGTCCGGTCGAGTGCGCACGATTGGAAATCGTGTACGGGGCAACCCG
TCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
gttgtgtgcg
Secondary structure (Cloverleaf model)
>WENV180098668	Ser	GGA
                   c      GCCA gttgtgtgcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    C T G A        C      | | | | |     G
  C         T A C G       G C G G G     C
  G         + | | |                 T T
  G         G T G C
    T C G A        G     TACGGGGCAACCCGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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