The detailed information of tRNA gene sequence


Sequence ID>WENV180098669
Genome IDMTBK01260731
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 107
End posion on genome 195
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
catattctgT
tRNA gene sequence 
GCTGAGGTAGTCTAGACCGGTAAGGCGCGGGCCTGGAAAGCCCGTGGGGCGTTGAGCCCC
TCGGGAGTTCAAATCTCCCCCTCAGCGTtt
Downstream region at tRNA end position 
ttgtctcttc
Secondary structure (Cloverleaf model)
>WENV180098669	Ser	GGA
                   T      GTtt ttgtctcttc
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      A G A        A      | | | | |     A
    C       T C T G       G G G A G     C
    C       | | + |                 T T
    G       A G G C
      G T A        G     TGGGGCGTTGAGCCCCTC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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