The detailed information of tRNA gene sequence


Sequence ID>WENV180098670
Genome IDMTBK01260731
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 695
End posion on genome 623
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tcatatctcc
tRNA gene sequence 
GGGCCCGTAGATCAGGGGAAGATCGTTTCGTTCGCAACGAAAAGGCCGCGGGTTCAAATC
CCGCCGGGTCCACtc
Downstream region at tRNA end position 
cttcttttgg
Secondary structure (Cloverleaf model)
>WENV180098670	Ala	CGC
                   c      ACtc cttcttttgg
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G C C C     A
        G A        A      | | | | |     A
      G     C T A G       G C G G G     C
      G     | | | |                 T T
      G     G A T C
        A A        G     AGGCC
                    T - A
                    T - A
                    T - A
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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