The detailed information of tRNA gene sequence


Sequence ID>WENV180098683
Genome IDMTBK01261133
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 818
End posion on genome 742
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aataatattt
tRNA gene sequence 
GGCCCAGTAGTTCAGTTGGTTAGAACGCTAGCCTGTCACGCTAGAGGCCGAGGGTTCGAG
TCCCTTCTGGGTCGCCA
Downstream region at tRNA end position 
ttttattata
Secondary structure (Cloverleaf model)
>WENV180098683	Asp	GTC
                   t      GCCA ttttattata
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G A G G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGCC
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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