The detailed information of tRNA gene sequence


Sequence ID>WENV180098687
Genome IDMTBK01261338
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 523
End posion on genome 451
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
taaaattgtc
tRNA gene sequence 
GCCGCGGTAGCTCAGTGGTAGAGCGCTTCTCTGAAAAAGAAGAGGTCGTCAGTTCAATTC
TGACTCGCGGCACat
Downstream region at tRNA end position 
atcagcgggt
Secondary structure (Cloverleaf model)
>WENV180098687	Phe	GAA
                   c      ACat atcagcgggt
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G + T          T T
                    T     C A G T C     A
        G A        A      | | | | |     A
      T     C T C G       G T C A G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    T - A
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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